Author

Elisabetta Fiore

University of WürzburgORCID 0000-0002-2419-2794Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:bacteria (other)· 2 Research Focus:gene regulatory network inference· 2 Assay:Ribo-seq· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Organism:E. coli· 1

Frequent Co-Authors

Cynthia Mira SharmaiD· 3 shared Rick GelhauseniD· 2 shared Rolf BackofeniD· 2 shared Abdelhakim BoudriouaiD· 1 shared Alicia Klaude· 1 shared Ana Rita BrochadoiD· 1 shared Annamaria ZannoniiD· 1 shared Azam RashidianiD· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

Cynthia Mira SharmaORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

MicrobiologybioRxivPreprintOct 1, 2026

Human-targeted drugs extensively reshape regulatory networks controlling virulence and antibiotic resistance in Salmonella Typhimurium

Martin K. Amstalden, Roberto Olayo-Alarcón, Susanne Brenzinger…·Ana Rita Brochado

The paper investigates how human-targeted drugs alter regulatory networks in Salmonella Typhimurium, revealing non-antibiotic compounds reshape virulence and antibiotic resistance through specific transcriptional responses.

DOI 10.64898/2026.09.30.755304

bacteria (other)bulk RNA-seq

𝕏 PostBluesky

MicrobiologybioRxivPreprintSep 28, 2026

Unveiling the small protein landscape of uropathogenic E. coli

Wenting Liu, Rick Gelhausen, Lisa Werland…·Jing Yuan

This study identifies 338 previously unannotated small open reading frames in UPEC strain CFT073, with functional evidence for nine intergenic sORFs and potential roles in stress response.

DOI 10.64898/2026.09.28.754932

E. coliRibo-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintNov 9, 2022

Complementary Ribo-seq approaches map the translatome and provide a small protein census in the foodborne pathogen Campylobacter jejuni

Kathrin Froschauer, Sarah L. Svensson, Rick Gelhausen…·Cynthia Mira Sharma

The paper uses complementary Ribo-seq methods to map the translatome of Campylobacter jejuni, identifying novel small open reading frames and refining gene annotations.

4 citations

bacteria (other)Ribo-seq

𝕏 PostBluesky