Author
Josef Hardi
Stanford UniversityORCID 0000-0002-2533-6681Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2023-2026 · peak 2/yrCo-Author Collaboration Network
10 top collaborators · 36 mutual co-author links5 papers
Recent·Most cited
- BioinformaticsScientific DataPeer-reviewed
A general strategy for generating expert-guided, simplified views of ontologies
Anita R. Caron, Aleix Puig-Barbe, Ellen M. Quardokus…·David Osumi-Sutherland
The paper presents tools to validate and simplify ontology term hierarchies for better usability in biomedical research.
5 citations - BioinformaticsScientific DataPeer-reviewed
Construction, Deployment, and Usage of the Human Reference Atlas Knowledge Graph for Linked Open Data
Andreas Bueckle, Bruce W. Herr, Josef Hardi…·Katy Börner
The paper introduces the Human Reference Atlas Knowledge Graph, a large-scale linked data resource for biological entities, and describes its construction, deployment, and usage.
6 citations - BioinformaticsNature MethodsPeer-reviewed
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage
Katy Börner, Philip D. Blood, Jonathan C. Silverstein…·Vilas Menon
This paper describes the construction and usage of the Human Reference Atlas (HRA) v2.0, which integrates multiscale data across 36 organs and provides tools for analysis and visualization.
51 citationstop 1% - BioinformaticsScientific DataPeer-reviewed
Specimen, Biological Structure, and Spatial Ontologies in Support of a Human Reference Atlas
Bruce W. Herr, Josef Hardi, Ellen M. Quardokus…·Katy Börner
This paper introduces the Common Coordinate Framework Ontology (CCFO) v2.0.1 to integrate specimen, biological structure, and spatial data for the Human Reference Atlas, enabling interoperability and programmatic access.
16 citations