Author

Nithya Bhasker

German Cancer Research CenterORCID 0000-0002-2666-8776Unclaimed ORCID profile · follow to get notified of new preprints

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Research Focus:clustering· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Organism:mouse· 1 Assay:scRNA-seq· 1 Research Focus:trajectory inference· 1

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Hattie ChungiD· 1 shared Louis BoucherieiD· 1 shared Melanie WeberiD· 1 shared Stefanie SpeideliD· 1 shared Vladislav KimiD· 1 shared

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2025-2025 · peak 1/yr

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Hattie ChungORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintAug 22, 2025

Contrastive Poincare Maps: uncovering developmental lineages from single-cell data with scalable hyperbolic embeddings

Nithya Bhasker, Hattie Chung, Louis Boucherie…·Melanie Weber

This paper introduces Contrastive Poincare Maps (CPM) for embedding developmental scRNA-seq data in hyperbolic space, achieving better hierarchy preservation and scalability than existing methods.

DOI 10.1101/2025.08.22.671789

mousescRNA-seq

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