Author

Juan Miguel Valverde

University of Eastern FinlandORCID 0000-0002-2708-1547Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:imaging· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Approach:experimental assay· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Jussi TohkaiD· 2 shared Olli H.J. GröhniD· 2 shared Riccardo De FeoiD· 2 shared Alejandra SierraiD· 1 shared Artem ShatilloiD· 1 shared Asla PitkäneniD· 1 shared Elina HämäläineniD· 1 shared Eppu MannineniD· 1 shared

Activity by Year

2021-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBioinformatics

Jussi TohkaORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintAug 3, 2021

Automatic segmentation of the rat brain hippocampus in MRI after traumatic brain injury

Riccardo De Feo, Elina Hämäläinen, Eppu Manninen…·Jussi Tohka

The paper develops a CNN-based method for automated hippocampus segmentation in rat MRI images post-TBI, showing superior performance compared to registration-based methods.

DOI 10.1101/2021.08.03.454863

ratimaging

𝕏 PostBluesky

BioinformaticsNeuroImagePeer-reviewedJan 14, 2021

Automated joint skull-stripping and segmentation with Multi-Task U-Net in large mouse brain MRI databases

Riccardo De Feo, Artem Shatillo, Alejandra Sierra…·Jussi Tohka

The paper introduces MU-Net, a convolutional neural network for automated skull-stripping and segmentation in mouse brain MRI, achieving high accuracy and speed.

40 citations

mouseimaging

𝕏 PostBluesky