Loren H. Rieseberg

The paper identifies shared genomic signatures of Arctic adaptation across distantly related plant species by comparing genome assemblies and analyzing selection pressures and repetitive elements.

This study uses historical and contemporary genomes of Ambrosia artemisiifolia to show that adaptive evolution is partly predictable at the level of polygenic traits and large structural variants, despite flexible genomic trajectories.

This study identifies genetic loci associated with fatty acid composition stability in sunflower across environments using GWAS and finds a large introgression linked to stability under high heat.

This study identifies locally adaptive chromosomal inversions in wild sunflowers and finds they are more common in sympatric populations and have distinct genomic features.

This study shows that genomic ancestry influences drought responses in Amaranthus tuberculatus, with allele frequency changes linked to climate fluctuations over time.

The paper uses genomic data to predict kelp population vulnerability to climate change and suggests assisted migration as a conservation strategy.

This study shows evolutionary rescue in wild populations during extreme drought by linking genetic variation to population recovery.

This study investigates the genetic basis of sex determination in waterhemp, revealing complex chromosomal diversity and phenotypic variability associated with the transition to dioecy.

The paper examines TE accumulation in Scalesia species and finds no significant variation despite hybridization and niche shifts, challenging the role of TEs in diversification.

This study identifies and maps a novel powdery mildew resistance locus (PM2) in Cannabis sativa using bulk-segregant analysis and high-throughput sequencing, and develops genetic markers for breeding.

The paper uses genome sequencing to show genetic drift impacts bull and giant kelp populations, with no purging of harmful alleles, and suggests conservation strategies.

The paper identifies large-effect structural variants driving parallel adaptation in multiple invasions of Ambrosia artemisiifolia across different continents.

The study shows that shared selection and genetic architecture lead to repeatable evolution in hybrid sunflower populations over 14 years.

The paper develops a chromosome-scale reference genome and genetic map for yellow starthistle, identifies QTLs associated with invader traits, and finds structural variants and paleolog enrichment linked to invasion-related adaptations.

The paper investigates the invasion history of wild sunflower in Argentina, finding that admixture with cultivated sunflower and genomic selection contributed to its establishment and spread.

This study shows biotic interactions enhance local adaptation to soil in Brassica rapa by promoting antagonistic pleiotropy through evolutionary history involving herbivory and pollination.

This paper presents a chromosome-level genome assembly of Streptanthus diversifolius, revealing a recent whole genome duplication in the Thelypodieae tribe.

The paper assesses the sufficiency of genetic diversity in sorghum germplasm repositories for climate adaptation by evaluating geographic distribution and genomic resilience scores.

RepeatOBserver visualizes tandem repeats and identifies centromeres using Fourier transforms, finding that centromeres are in low-diversity repeat regions.

This study predicts adaptive genetic and plastic gene expression responses to climate change in Populus lasiocarpa using genomic and transcriptomic data.

The paper uses population genomics to analyze contemporary and Little-Ice-Age samples of Arctic White Heather, finding multiple Pleistocene refugia across the Arctic.

The paper investigates the genomic basis of invasiveness in Ambrosia artemisiifolia, finding selection signatures in defense genes and reduced pathogen prevalence in invasive populations.

This study analyzes the genomic and phenotypic impacts of wild introgressions in sunflower, finding that while some traits improve, most introgressions negatively affect yield and quality.

The paper presents a draft genome of Alliaria petiolata to support invasion genetics research and conservation strategies.

The paper updates ePlant to support 15 new plant species and adds new viewers and data sets, including single-cell RNA-seq data for Arabidopsis roots.

The paper uses image analysis and genome-wide association studies to identify genetic loci affecting seed-coat characteristics in sunflower.

The paper tests for index switching in Illumina HiSeq sequencing data and finds no evidence of increased switching on HiSeq X.