Stephanie Reynolds

The paper introduces CosMIC, a new metric for evaluating spike inference accuracy in calcium imaging, showing it better discriminates precision and recall than existing metrics.

This paper introduces an adaptive spiral scanning algorithm for multi-photon microscopy to improve temporal resolution in neural activity imaging.

ABLE detects cell locations in two-photon calcium imaging data using a level set method, achieving 67.5% success on a manually labelled mouse in vivo dataset.

This paper extends the FRI framework for calcium transient detection to include GCaMP6s data, achieving 90% spike detection accuracy on real data.

The paper compares spike detection performance using FRI methods with new GECIs and a synthetic dye, calculating Cramer-Rao bounds for spike position uncertainty.