Author

Manuela Vecchi

Italian Institute of TechnologyORCID 0000-0002-2750-9160Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:chromatin & epigenetic regulation· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Alessandro CoppeiD· 2 shared Andrea CavalliiD· 2 shared Debora Charrance· 2 shared Fabio LanduzziiD· 2 shared Federica Furia· 2 shared Sara TrovaiD· 2 shared Stefano GustincichiD· 2 shared Agata Fant· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 43 mutual co-author links

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2 shared papersBioinformatics

Alessandro CoppeORCID

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2 papers

Recent·Most cited

GeNePi: a GPU-enhanced Next Generation Bioinformatics Pipeline for Whole Genome Sequencing Analysis

Stefano Marangoni, Federica Furia, Debora Charrance, Agata Fant, Salvatore Di Dio, Sara Trova, Giovanni Spirito, Francesco Musacchia, Alessandro Coppe, Stefano Gustincich, Andrea Cavalli, Manuela Vecchi, Fabio Landuzzi

GeNePi is a GPU-enhanced bioinformatics pipeline for WGS analysis that efficiently identifies genomic variants with performance comparable to state-of-the-art tools.

bioRxiv · Jan 30, 2025 · PreprintBioinformatics

Hybridization load introduced by Alpine ibex hybrid swarms

F. Gözde Çilingir, Fabio Landuzzi, Alice Brambilla, Debora Charrance, Federica Furia, Sara Trova, Alberto Peracino, Glauco Camenisch, Dominique Waldvogel, Jo Howard‐McCombe, Yeraldin Chiquinquira Castillo De Spelorzi, Edoardo Henzen, Andrea Bernagozzi, Alessandro Coppe, Jean Marc Christille, , Christine Grossen

The paper estimates hybridization load in Alpine ibex due to hybridization with domestic goats, finding increased loss-of-function mutations in hybrids compared to non-hybrids.

bioRxiv · Jun 24, 2024 · PreprintEvolutionary Biology