F. Gözde Çilingir

lcUMAPtSNE: Use of non-linear dimensionality reduction techniques with genotype likelihoods

The paper develops a workflow using UMAP and t-SNE on genotype likelihoods from low-coverage sequencing to analyze population structure in scimitar-horned oryx.

Hybridization load introduced by Alpine ibex hybrid swarms

The paper estimates hybridization load in Alpine ibex due to hybridization with domestic goats, finding increased loss-of-function mutations in hybrids compared to non-hybrids.

Chromosome-level genome assembly for the Aldabra giant tortoise enables insights into the genetic health of a threatened population

The paper presents a chromosome-level genome assembly for the Aldabra giant tortoise and uses it to analyze population structure and genetic origins.