Author

Alex Miranda

BC Cancer – VictoriaORCID 0000-0002-3086-5326Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Phineas T. HamiltoniD· 3 shared Brad H. NelsoniD· 2 shared Katy MilneiD· 2 shared Adrian N. C. Wan· 1 shared Alexandre Bouchard-Côté· 1 shared Ali BashashatiiD· 1 shared Allen W. ZhangiD· 1 shared Allyson C. BanvilleiD· 1 shared

Activity by Year

2017-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersCancer Biology

Phineas T. HamiltonORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintMay 12, 2025

Prognostically favorable immune responses to ovarian cancer are distinguished by self-reactive intra-epithelial plasma cells

Allyson C. Banville, Céline M. Laumont, Karanvir Singh…·Brad H. Nelson

The paper identifies self-reactive intra-epithelial plasma cells in ovarian cancer that correlate with improved prognosis and suggest a mechanism for immune response against tumor heterogeneity.

1 citation

humanscRNA-seq

Molecular BiologyNucleic Acids ResearchPeer-reviewedJan 13, 2022

Cytoplasmic Switch of ARS2 Isoforms Promotes Nonsense-Mediated mRNA Decay and Arsenic Sensitivity

Monica Mesa-Perez, Phineas T. Hamilton, Alex Miranda…·Perry L. Howard

The paper shows that alternative splicing of ARS2 generates cytoplasmic isoforms that switch ARS2's function from inhibiting to promoting nonsense-mediated mRNA decay and enhance arsenic stress response.

4 citations

Cancer BiologybioRxivPreprintOct 4, 2017

The interface of malignant and immunologic clonal dynamics in high-grade serous ovarian cancer

Allen W. Zhang, Andrew McPherson, Katy Milne…·Sohrab P. Shah

The paper analyzes the interaction between tumor and immune clones in ovarian cancer, finding that immune contexture patterns mirror malignant spread and that foldback inversions correlate with poor outcomes.

DOI 10.1101/198101

humanwhole-genome sequencing