Author

Sofia B Raak

University of BristolORCID 0000-0002-3114-5371Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Organism:Drosophila· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1 Assay:proteomics· 1

Frequent Co-Authors

Cian O'DonnelliD· 2 shared Jonathan G. HanleyiD· 1 shared Judith A H WodkeiD· 1 shared Melanie I StefaniD· 1 shared Patricia RubischiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 7 mutual co-author links

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2 shared papersNeuroscience

Cian O'DonnellORCID

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2 papers

Recent·Most cited

NeurosciencebioRxivPreprintNov 2, 2026

Resource competition controls the length-dependence of synaptic protein synthesis

Patricia Rubisch, Sofia B Raak, Judith A H Wodke…·Cian O'Donnell

This study proposes a computational model explaining length-dependent protein synthesis during synaptic plasticity, showing it results from a shift in ribosomal regulation mechanisms.

DOI 10.64898/2026.10.30.763010

proteomicsstatistical model

𝕏 PostBluesky

Molecular BiologyJournal of The Royal Society InterfacePeer-reviewedFeb 1, 2025

Competition effects regulating the composition of the microRNA pool

Sofia B. Raak, Jonathan G. Hanley, Cian O’Donnell

The paper models pre-miRNA competition for Dicer and validates it using in vitro and ex vivo data, showing that efficient Dicer interaction and TRBP association influence mature miRNA levels.

2 citations

Drosophilamouse

𝕏 PostBluesky