Author

Rickey R. Shah

Broad InstituteORCID 0000-0002-3231-0367Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:phylogenetics / evolution· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:human· 1 Organism:virus· 1

Frequent Co-Authors

Brandon Sabina· 2 shared Bridget ChakiD· 2 shared Bronwyn L. MacInnisiD· 2 shared Christian B. Matranga· 2 shared Daniel J. ParkiD· 2 shared Hayden C. MetskyiD· 2 shared James Qu· 2 shared Nathan L. YozwiakiD· 2 shared

Activity by Year

2017-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Brandon Sabina

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2 papers

Recent·Most cited

Co-circulating mumps lineages at multiple geographic scales

Shirlee Wohl, Hayden C. Metsky, Stephen F. Schaffner, Anne L Piantadosi, Meagan Burns, Joseph A. Lewnard, Bridget Chak, Lydia Andreyevna Krasilnikova, Katherine J. Siddle, Christian B. Matranga, Bettina Bankamp, Scott Hennigan, Brandon Sabina, Elizabeth H. Byrne, Rebecca J. McNall, , Pardis Christine Sabeti

The paper analyzes mumps virus circulation in the US using genomic data to show multiple co-circulating lineages and transmission patterns, but finds no evidence of vaccine escape variants.

PLoS Biology · Feb 11, 2020Peer-reviewedGenomics

Genome sequencing reveals Zika virus diversity and spread in the Americas

Hayden C. Metsky, Christian B. Matranga, Shirlee Wohl, Stephen F. Schaffner, Catherine A. Freije, Sarah M. Winnicki, Kendra L. West, James Qu, Mary Lynn Baniecki, Adrianne D. Gladden, Aaron E. Lin, Christopher H. Tomkins-Tinch, Simon H. Ye, Daniel J. Park, Cynthia Y. Luo, , Pardis Christine Sabeti

This study sequenced 110 Zika virus genomes from 10 countries, revealing rapid expansion in Brazil, multiple introductions into other regions, and undetected circulation before confirmed cases.

Nature · May 23, 2017Peer-reviewedGenomics