Author

Joseph A. Lewnard

Kaiser PermanenteORCID 0000-0002-8505-8839Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:phylogenetics / evolution· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:differential expression· 1 Approach:genetic perturbation / CRISPR· 1 Organism:human· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Anne L PiantadosiiD· 1 shared Bettina BankampiD· 1 shared Brandon Sabina· 1 shared Bridget ChakiD· 1 shared Bronwyn L. MacInnisiD· 1 shared Christian B. Matranga· 1 shared Daniel J. ParkiD· 1 shared Elizabeth H. ByrneiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperGenomics

Anne L PiantadosiORCID

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2 papers

Recent·Most cited

Evolutionary BiologybioRxivPreprintApr 18, 2026

Frequent seasonal reassortment between high and low path viruses drives the diversification of influenza A/H5N1

Lambodhar Damodaran, Joseph A. Lewnard, Gregg S. Davis…·Nicola Felix Müller

The paper shows that seasonal reassortment between high and low pathogenic influenza A/H5N1 viruses drives genotype diversification, with ducks, geese, and the Central flyway as key sources.

2 citations

whole-genome sequencingstatistical model

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GenomicsPLoS BiologyPeer-reviewedFeb 11, 2020

Co-circulating mumps lineages at multiple geographic scales

Shirlee Wohl, Hayden C. Metsky, Stephen F. Schaffner…·Pardis Christine Sabeti

The paper analyzes mumps virus circulation in the US using genomic data to show multiple co-circulating lineages and transmission patterns, but finds no evidence of vaccine escape variants.

58 citationstop 2%

humanwhole-genome sequencing

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