Xiao Hu

The paper analyzes 328 Actinobacillus pleuropneumoniae genomes to explore relationships between genomic lineages, K:O antigen genotypes, and Apx toxin repertoires, finding strong associations between lineage and these traits.

The paper identifies a new genotype of HPAI H5N1 virus in dairy cattle, showing genetic changes but lacking key mutations for mammalian adaptation.

GOThresher removes annotation biases from protein function annotation datasets to improve the quality of data for machine learning models.

POEM identifies core operons in metagenomic data with high accuracy, demonstrating its utility in analyzing multi-gene functionalities in human gut metagenomes.

SwiftOrtho efficiently classifies orthology across large genomic datasets with low memory usage and high accuracy.