Author

Mohammed M. A. Ahmed

Al-Azhar UniversityORCID 0000-0002-3339-1242Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Assay:metabolomics· 1 Research Focus:software / tool· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Paul D. BoudreauiD· 2 shared Alan K. JarmuschiD· 1 shared Alexis D. WagneriD· 1 shared Allegra T. AroniD· 1 shared Andrea Vicini· 1 shared Andrew C. McAvoyiD· 1 shared Anelize BauermeisteriD· 1 shared Ashootosh TripathiiD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersGenomics

Paul D. BoudreauORCID

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2 papers

Recent·Most cited

GenomicsG3 Genes Genomes GeneticsPeer-reviewedJun 11, 2025

Using Repeated Lysis Steps Fractionates Between Heterotrophic and Cyanobacterial DNA Extracted from Xenic Cyanobacterial Cultures

Alexis D. Wagner, Mohammed M. A. Ahmed, Victoria Aileen Starks, Paul D. Boudreau

The paper develops an iterative lysis protocol to enrich cyanobacterial DNA from xenic cultures, improving genome assembly quality and reducing heterotrophic microbiome contamination.

2 citations

whole-genome sequencingexperimental assay

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BioinformaticsbioRxivPreprintAug 6, 2022

✦ In-depth digest

A Universal Language for Finding Mass Spectrometry Data Patterns

Alan K. Jarmusch, Allegra T. Aron, Daniel Petras…·Mingxun Wang

MassQL, an open-source query language, lets users search raw mass spectrometry data from any vendor for isotope, fragmentation and neutral-loss patterns, from one file to entire public repositories.

41 citations

metabolomicssoftware / tool

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