Małgorzata Orłowska

Conformational diversity in poly-HAMP arrays and its implications for signal transduction

The paper investigates conformational diversity in poly-HAMP arrays and shows that axial helix rotation may be a conserved mechanism for signal transduction across different HAMP-containing systems.

pLAST - a tool for rapid comparison and classification of bacterial plasmid sequences

pLAST improves plasmid classification by combining ORF similarity and gene neighborhood conservation, outperforming existing methods in detecting functional modules and types.

AlphaFold2 captures the conformational landscape of the HAMP signaling domain

The paper uses AlphaFold2 to generate 5000 models of the HAMP domain, revealing its conformational variability and structural conservation across families.

Metabolic potential, ecology and presence of endohyphal bacteria is reflected in genomic diversity of Mucoromycotina

The paper reports genomic sequences of six Mucoromycotina fungi and an associated bacterium, linking genomic diversity to metabolic traits and ecological features.