Author

Mel Krajden

University of British ColumbiaORCID 0000-0002-3477-8748Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 1 Approach:experimental assay· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Amee R. MangesiD· 2 shared Agatha N. JassemiD· 1 shared Aidan M. NikiforukiD· 1 shared Andrew J. J. MungalliD· 1 shared Angus WongiD· 1 shared Cassidy NelsoniD· 1 shared Clayton MacDonald· 1 shared David D. W. TwaiD· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersBioinformatics

Amee R. MangesORCID

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2 papers

Recent·Most cited

BugSplit: highly accurate taxonomic binning of metagenomic assemblies enables genome-resolved metagenomics

Induja Chandrakumar, Nick P.G. Gauthier, Cassidy Nelson, Michael B. Bonsall, Kerstin Locher, Marthe Charles, Clayton MacDonald, Mel Krajden, Amee R. Manges, Samuel D. Chorlton

BugSplit improves taxonomic binning of metagenomic assemblies, enabling accurate detection of novel pathogens and separation of pathogen from host and microbiota sequences.

Communications Biology · Feb 22, 2022Peer-reviewedBioinformatics

Optimization of magnetic bead-based nucleic acid extraction for SARS-CoV-2 testing using readily available reagents

Simon Haile, Aidan M. Nikiforuk, Pawan K. Pandoh, David D. W. Twa, Duane E. Smailus, Jason Nguyen, Stephen Pleasance, Angus Wong, Yongjun Zhao, Diane L. Eisler, Michelle Moksa, Qi Cao, Marcus Wong, Edmund Su, Martin I. Krzywinski, , Martin Hirst

The paper optimizes a magnetic bead-based nucleic acid extraction protocol for SARS-CoV-2 testing to reduce cross-well contamination while maintaining sensitivity.

Journal of Virological Methods · Oct 21, 2021Peer-reviewedGenetic & Genomic Medicine