Author

Gavin Chapman

Victor Chang Cardiac Research InstituteORCID 0000-0002-3513-723XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:GWAS / association mapping· 1 Organism:human· 1

Frequent Co-Authors

Sally L. DunwoodieiD· 3 shared David Scott WinlawiD· 2 shared Eleni GiannoulatouiD· 2 shared Gary F. SholleriD· 2 shared Gillian M. BlueiD· 2 shared Natasha NassariD· 2 shared Patrick TamiD· 2 shared Samantha J. LainiD· 2 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Sally L. DunwoodieORCID

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3 papers

Recent·Most cited

Developmental BiologyNature CommunicationsPeer-reviewedJan 22, 2026

Neural crest cell derived DKK1 modulates Wnt signalling in the second heart field to orchestrate cardiac outflow tract development

Sophie Wiszniak, Dimuthu Alankarage, Iman Lohraseb…·Quenten Schwarz

The paper identifies DKK1 from neural crest cells as a regulator of Wnt signaling in the second heart field, crucial for cardiac outflow tract development and linked to congenital heart disease.

4 citationstop 3%

mouseexperimental assay

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GenomicsBioinformatics AdvancesPeer-reviewedDec 26, 2024

Benchmarking of variant pathogenicity prediction methods using a population genetics approach

Mikhail Gudkov, Loïc Thibaut, Steven Monger…·Samantha J. Lain

This study benchmarks variant pathogenicity predictors using population genetics data, finding CADD and REVEL as the best performers and highlighting biases in ClinVar-based training.

3 citations

whole-genome sequencingstatistical model

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GenomicsbioRxivPreprintOct 12, 2022

A pluripotent stem cell atlas of multilineage differentiation reveals TMEM88 as a developmental regulator of mammalian blood pressure

Sophie Shen, Tessa R. Werner, Samuel W. Lukowski…·Nathan J. Palpant

The paper creates an iPSC differentiation atlas and identifies TMEM88 as a regulator of mesendodermal development and blood pressure.

2 citations

humanbulk RNA-seq

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