Author

JungHo Kong

University of California San DiegoORCID 0000-0002-3532-3163Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Neuroscience· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Ingoo LeeiD· 2 shared Sarah N. WrightiD· 2 shared Trey E. IdekeriD· 2 shared Akshat SinghaliD· 1 shared Arianna Colini BaldeschiiD· 1 shared Chan‐Young OckiD· 1 shared Chang Ho Ahn· 1 shared David LaubiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersNeuroscience

Ingoo LeeORCID

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2 papers

Recent·Most cited

NeurosciencebioRxivPreprintSep 9, 2025

Redefining Parkinson's Disease by Dysregulated Genetic Networks in Distinct Cell Types

Jane Yang, Arianna Colini Baldeschi, JungHo Kong…·Trey E. Ideker

This paper identifies six PD subgroups based on cell-type-specific genetic networks and links NRG6 to reduced myelin integrity in oligodendrocytes.

DOI 10.1101/2025.09.09.674964

humanbulk RNA-seq

Systems BiologybioRxivPreprintSep 8, 2025

Translating clinical gene sequencing into a foundational representation of tumor subtype

JungHo Kong, Ingoo Lee, Dean Boecher…·Trey E. Ideker

This paper introduces MutationProjector, an AI model that converts tumor mutation profiles into cancer subtype representations, achieving strong performance in predicting treatment responses and classifying metastasis.

1 citation

humanwhole-exome sequencing