Stefano Maria Marino

FoldARE improves RNA secondary structure prediction by using pseudo-SHAPE constraints from structural ensembles, achieving high accuracy across benchmark datasets.

The paper introduces Cell Marker Accordion, a tool for accurate and interpretable single-cell and spatial omics annotation across health and disease contexts.

This study shows TERRA, a telomeric lncRNA, localizes to stress granules in human ALT cells under stress conditions.

This paper develops a computational pipeline for 16S metabarcoding using Oxford Nanopore sequencing, optimized for on-site environmental monitoring.

This paper introduces a new method for representing protein sequences and scoring alignments by stylizing amino acids, offering customizable parameterization for substitution analysis.