Author

Ségolène Caboche

Centre National de la Recherche ScientifiqueORCID 0000-0002-3658-3477Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Assay:imaging· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Benjamin IstaceiD· 1 shared Bérengère VilleretiD· 1 shared Camille MarchetiD· 1 shared Christophe DesterkeiD· 1 shared Corinne Da SilvaiD· 1 shared Delphine BeuryiD· 1 shared Florence MaurieriD· 1 shared Hélène TouzetiD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Benjamin IstaceORCID

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2 papers

Recent·Most cited

Mucosal vaccine immunity induced by a new auxotrophic Pseudomonas aeruginosa strain is linked to Th17 and IgA responses

Youssouf Sérémé, Bérengère Villeret, Ségolène Caboche, Samuel IKEH, Delphine Beury, Florence Maurier, Christophe Desterke, Maëlys Born-Bony, Z Xing, Romé Voulhoux, Jean‐Michel Sallenave

This study shows a new auxotrophic Pseudomonas aeruginosa vaccine strain induces Th17 and IgA responses, offering mucosal protection against infection.

bioRxiv · Oct 3, 2025 · PreprintImmunology

Comparative assessment of long-read error-correction software applied to RNA-sequencing data

Leandro Lima, Camille Marchet, Ségolène Caboche, Corinne Da Silva, Benjamin Istace, Jean‐Marc Aury, Hélène Touzet, Rayan Chikhi

This paper benchmarks long-read error-correction tools on RNA-sequencing data, finding they improve base-pair accuracy but affect gene family sizes and isoform diversity.

Briefings in Bioinformatics · Apr 25, 2019Peer-reviewedBioinformatics