Author

Debleena Basu

Indian Institute of Chemical BiologyORCID 0000-0002-3694-8915Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Cancer Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:differential expression· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Abdullah KahramaniD· 1 shared Anna Bratus-NeuenschwanderiD· 1 shared Christian von MeringiD· 1 shared Hella Anna BolckiD· 1 shared Holger MochiD· 1 shared Hubert RehraueriD· 1 shared Natalia ZajaciD· 1 shared Poulomi SarkariD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperCancer Biology

Abdullah KahramanORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Cancer BiologybioRxivPreprintMar 15, 2024

Heterogeneous and Novel Transcript Expression in Single Cells of Patient-Derived ccRCC Organoids

Tülay Karakulak, Natalia Zajac, Hella Anna Bolck…·Abdullah Kahraman

This study uses single-cell long-read sequencing to analyze transcriptomes of ccRCC organoids, identifying novel transcripts and highlighting cell-specific alternative splicing events.

2 citations

humanscRNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintJun 19, 2023

The molecular prognostic score, a classifier for risk stratification of high-grade serous ovarian cancer

Siddik Sarkar, Sarbar Ali Saha, Poulomi Sarkar…·Pralay Mitra

The paper develops a 20-gene molecular prognostic score (mPS) for high-grade serous ovarian cancer (HGSOC) that outperforms conventional clinical parameters in predicting 5-year survival.

DOI 10.1101/2023.06.19.545525

humanbulk RNA-seq

𝕏 PostBluesky