Anna Bratus-Neuenschwander

The paper develops a hybrid sequencing strategy combining short-read and long-read methods to enhance genotype-phenotype analysis at single-cell resolution.

This study uses single-cell long-read sequencing to analyze transcriptomes of ccRCC organoids, identifying novel transcripts and highlighting cell-specific alternative splicing events.

This study compares AAV2 DNA replication mechanisms under HSV-1 and AdV5 helper virus conditions, finding that HSV-1 supports rolling circle replication while AdV5 supports rolling hairpin replication.

This study presents haplotype-resolved chromosome pairs and transcriptome of a diploid African cassava cultivar using HiFi sequencing and Hi-C, revealing structural variations and allele-specific expression patterns.

This study evaluates Nanopore native RNA sequencing on complex transcriptomes, finding it has potential but faces challenges in full-length transcript capture and origin inference.