Author

Alex J. Rai

Columbia University Irving Medical CenterORCID 0000-0002-3734-4590Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Molecular Biology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:benchmarking· 2 Research Focus:database / resource· 2 Research Focus:differential expression· 2 Research Focus:software / tool· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Amanda PengiD· 1 shared Amin YakubuiD· 1 shared Brett A. KaufmaniD· 1 shared Caroline TrumpffiD· 1 shared Gabriel SturmiD· 1 shared Jeremy MichelsoniD· 1 shared Kenneth OforiiD· 1 shared Lyssa Dimapanat· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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1 shared paperMolecular Biology

Amanda PengORCID

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Author profile →

3 papers

Recent·Most cited

A workflow using diaPASEF global quantitative proteomic analysis reveals extracellular vesicle biomarker candidates for non-invasive diagnostics in non-small cell lung cancer

Manan Vij, Patrick Kurnia, Lyssa Dimapanat, Rajesh Kumar Soni, Alex J. Rai

This study uses diaPASEF proteomic analysis of extracellular vesicles from lung cancer cell lines to identify urine-detectable protein biomarkers for non-invasive diagnostics of non-small cell lung cancer subtypes.

bioRxiv · Oct 26, 2025 · PreprintPathology

MitoQuicLy: a high-throughput method for quantifying cell-free DNA from human plasma, serum, and saliva

Jeremy Michelson, Shannon Rausser, Amanda Peng, Temmie Yu, Gabriel Sturm, Caroline Trumpff, Brett A. Kaufman, Alex J. Rai, Martin A. Picard

MitoQuicLy quantifies cf-mtDNA in plasma, serum, and saliva with high agreement to column-based methods, showing significant inter-individual and biofluid-specific differences.

Mitochondrion · Jul 1, 2023Peer-reviewedMolecular Biology

Identifying Therapeutic Strategies in IgA Nephropathy through Comprehensive Transcriptomic Characterization

Kenneth Ofori, Amin Yakubu, Alex J. Rai

This study identifies therapeutic targets in IgA nephropathy by analyzing transcriptomic deviations and altered pathways in glomeruli.

bioRxiv · Aug 18, 2021 · PreprintBioinformatics