Author

Denisa Šrámková

Masaryk UniversityORCID 0000-0002-3746-5114Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:machine learning (classical)· 1 Assay:protein sequence· 1 Research Focus:sequence-to-function modeling· 1

Frequent Co-Authors

Agata P. PerlinskaiD· 1 shared Dawid Uchal· 1 shared Eva KlimentováiD· 1 shared Joanna Ida SulkowskaiD· 1 shared Maciej SikoraiD· 1 shared Mai Lan NguyeniD· 1 shared Marta KorpacziD· 1 shared Paweł RubachiD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Agata P. PerlinskaORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

BioinformaticsProtein SciencePeer-reviewedJun 18, 2024

Knot or Not? Sequence-Based Identification of Knotted Proteins With Machine Learning

Maciej Sikora, Eva Klimentová, Dawid Uchal…·Joanna Ida Sulkowska

This study uses machine learning to predict protein knotting from amino acid sequences, achieving 98.5% accuracy using AlphaFold predictions and UniProt data.

13 citations

protein sequencemachine learning (classical)

𝕏 PostBluesky