Author
University of WarsawORCID 0000-0003-2806-1190Unclaimed ORCID profile · follow to get notified of new preprints
3 papers
Recent·Most cited
Fernando Bruno da Silva, Agata P. Perlinska, Jacek Płonka…·Joanna Ida Sulkowska
The paper uses AlphaFold to analyze protein structures and identifies new lasso motifs, including knotted lasso proteins, and explores their topological complexity and conservation.
Maciej Sikora, Eva Klimentová, Dawid Uchal…·Joanna Ida Sulkowska
This study uses machine learning to predict protein knotting from amino acid sequences, achieving 98.5% accuracy using AlphaFold predictions and UniProt data.
Agata P. Perlinska, Wanda H. Niemyska, Bartosz A. Gren…·Joanna Ida Sulkowska
The paper analyzes AlphaFold-predicted human protein structures to identify knots, finding 65 robustly knotted proteins, including a new complex knot type.