Author

Alex Laude

Newcastle UniversityORCID 0000-0002-3853-1187Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Assay:imaging· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Caterina Strambio‐De‐CastilliaiD· 2 shared David GrünwaldiD· 2 shared Glyn NelsoniD· 2 shared Judith LacosteiD· 2 shared Mathias HammeriD· 2 shared Orestis FaklarisiD· 2 shared Roland NitschkeiD· 2 shared Ulrike BoehmiD· 2 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersBioinformatics

Caterina Strambio‐De‐CastilliaORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Developmental BiologyPLoS GeneticsPeer-reviewedNov 27, 2023

Spatial transcriptomics reveals novel genes during the remodelling of the embryonic human arterial valves

Rachel A. Queen, Moira Crosier, Lorraine Eley…·Deborah J. Henderson

This study uses spatial transcriptomics to analyze human embryonic arterial valves, identifying novel genes and pathways involved in valve development and highlighting limitations in current genomic databases.

11 citations

humanmouse

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BioinformaticsNature MethodsPeer-reviewedDec 1, 2021

Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model

Mathias Hammer, Maximiliaan Huisman, Alessandro Rigano…·Caterina Strambio‐De‐Castillia

This paper proposes tiered metadata specifications for light microscopy to improve data quality, reproducibility, and interoperability, inspired by genomic standards like Encode.

28 citationstop 4%

imagingdatabase / resource

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BioinformaticsbioRxivPreprintMay 31, 2021

Micro-Meta App: an interactive software tool to facilitate the collection of microscopy metadata based on community-driven specifications

Alex Rigano, Shannon R. Ehmsen, Serkan Utku Öztürk…·Caterina Strambio‐De‐Castillia

Micro-Meta App is an open-source tool that helps collect and organize microscopy metadata according to community standards, improving reproducibility and data sharing.

6 citations

imagingexperimental assay

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