Author

Judith Lacoste

MIA Cellavie Inc. (Canada)ORCID 0000-0002-8783-8599Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:imaging· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Alex LaudeiD· 2 shared Caterina Strambio‐De‐CastilliaiD· 2 shared David GrünwaldiD· 2 shared Glyn NelsoniD· 2 shared Mathias HammeriD· 2 shared Orestis FaklarisiD· 2 shared Roland NitschkeiD· 2 shared Ulrike BoehmiD· 2 shared

Activity by Year

2021-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 44 mutual co-author links

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2 shared papersBioinformatics

Alex LaudeORCID

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2 papers

Recent·Most cited

Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model

Mathias Hammer, Maximiliaan Huisman, Alessandro Rigano, Ulrike Boehm, James J Chambers, Nathalie Gaudreault, Alison J. North, Jaime A Pimentel, Damir Sudar, Peter Bajcsy, Claire M Brown, Alexander D Corbett, Orestis Faklaris, Judith Lacoste, Alex Laude, , Caterina Strambio‐De‐Castillia

This paper proposes tiered metadata specifications for light microscopy to improve data quality, reproducibility, and interoperability, inspired by genomic standards like Encode.

Nature Methods · Dec 1, 2021Peer-reviewedBioinformatics

Micro-Meta App: an interactive software tool to facilitate the collection of microscopy metadata based on community-driven specifications

Alex Rigano, Shannon R. Ehmsen, Serkan Utku Öztürk, Joël Ryan, Alexander K. Balashov, Mathias Hammer, Koray Kırlı, Karl D. Bellve, Ulrike Boehm, Claire M. Brown, James J. Chambers, Robert A. Coleman, Andrea Cosolo, Orestis Faklaris, Kevin E. Fogarty, , Caterina Strambio‐De‐Castillia

Micro-Meta App is an open-source tool that helps collect and organize microscopy metadata according to community standards, improving reproducibility and data sharing.

bioRxiv · May 31, 2021 · PreprintBioinformatics