Kayla D. Schimke

The paper adapts R2C2 sequencing for low-cost, rapid plasmid sequencing and introduces Chopper, a pipeline that generates full-length plasmid sequences from Oxford Nanopore data.

Mandalorion v4 improves isoform identification and quantification from full-length transcriptome sequencing data, showing high precision and recall even without genome annotation.

The paper demonstrates that Illumina short-read libraries can be sequenced on the ONT MinION with high accuracy using the R2C2 method, achieving error rates comparable to Illumina MiSeq.