Author

Inder M. Verma

Salk Institute for Biological StudiesORCID 0000-0002-4059-075XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Synthetic Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 2 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1 Organism:yeast· 1

Frequent Co-Authors

Gerald M. PaoiD· 2 shared Junko Ogawa· 2 shared Nina U Tonnu· 2 shared Atsushi MiyawakiiD· 1 shared Chitra Gopinath· 1 shared Curt WittenbergiD· 1 shared Erik T. SaberskiiD· 1 shared Ethan R. DeyleiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersSystems Biology

Gerald M. PaoORCID

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2 papers

Recent·Most cited

Existence of Causation without Correlation in Transcriptional Networks

Gerald M. Pao, Ethan R. Deyle, Hao Ye, Junko Ogawa, Marisela Guaderrma, Manching Ku, Tom Lorimer, Nina U Tonnu, Erik T. Saberski, Joseph C. Park, Eugene Ke, Curt Wittenberg, Inder M. Verma, George Sugihara

The paper shows that causal relationships can exist in transcriptional networks without correlation, using nonlinear causality tests to detect uncorrelated causal links in yeast and mouse.

bioRxiv · Feb 10, 2026 · PreprintSystems Biology

Genetic manipulation of the optical refractive index in living cells

Junko Ogawa, Yoko Iwata, Nina U Tonnu, Chitra Gopinath, Ling Huang, Sachihiko Itoh, Ryoko Ando, Atsushi Miyawaki, Inder M. Verma, Gerald M. Pao

This paper demonstrates the manipulation of the optical refractive index in mammalian cells using cephalopod reflectin protein nanoparticles and shows their application in microscopy techniques.

bioRxiv · Jul 9, 2020 · PreprintSynthetic Biology