Author

Akinori Yabuki

Japan Agency for Marine-Earth Science and TechnologyORCID 0000-0002-4070-0226Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Evolutionary Biology· 4

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 3 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:database / resource· 1 Research Focus:development & morphogenesis· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Kazuo InabaiD· 3 shared Kogiku ShibaiD· 3 shared Ryo HaradaiD· 3 shared Yuji InagakiiD· 3 shared Mami NomuraiD· 2 shared Takuro NakayamaiD· 2 shared Aika ShibataiD· 1 shared Andrew J. RogeriD· 1 shared

Activity by Year

2025-2025 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersEvolutionary Biology

Kazuo InabaORCID

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4 papers

Recent·Most cited

Evolutionary BiologyCommunications BiologyPeer-reviewedDec 18, 2025

Apusomonad photophobic behavior highlights cytoskeletal responses to blue light in early eukaryotes

Aika Shibata, Chiaki Yamamoto, Yuma Tani…·Kazuo Inaba

This study reports photophobic behavior in the apusomonad Podomonas kaiyoae, revealing cytoskeletal responses to blue light involving dynein/tubulin and myosin/actin systems.

1 citation

experimental assayhost-pathogen & immune response

𝕏 PostBluesky

Evolutionary BiologybioRxivPreprintMay 2, 2025

A cellular entity retaining only its replicative core: Hidden archaeal lineage with an ultra-reduced genome

Ryo Harada, Yuki Nishimura, Mami Nomura…·Takuro Nakayama

The paper discovers a novel archaeon with an extremely reduced genome, suggesting a new lineage of cellular life with minimal metabolic capabilities and heavy host dependence.

7 citations

DNA methylationstatistical model

𝕏 PostBluesky

Evolutionary BiologyJournal of Eukaryotic MicrobiologyPeer-reviewedMay 1, 2025

Complete mitochondrial genomes of ancyromonads provide clues for the gene content and genome structures of ancestral mitochondria.

Ryo Harada, Takashi Shiratori, Akinori Yabuki…·Ryoma Kamikawa

The paper reports mitochondrial genomes from three Ancyromonadida protists, revealing novel gene features and expanding the known mitochondrial gene repertoire of ancestral eukaryotes.

1 citation

whole-genome sequencingexperimental assay

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Evolutionary BiologyMicrobes and EnvironmentsPeer-reviewedJan 1, 2025

Drastic genome reduction driven by parasitic lifestyle: Two complete genomes of endosymbiotic bacteria possibly hosted by a dinoflagellate

Takuro Nakayama, Ryo Harada, Akinori Yabuki…·Yuji Inagaki

The paper reports two reduced genomes of endosymbiotic bacteria hosted by a dinoflagellate, revealing genome reduction and alternative genetic code usage.

5 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky