Jinyeop Song

Agentic campaign control for high-throughput de novo binder design

This paper introduces T-REX, an agentic framework for protein binder design that adaptively allocates compute resources across methods, achieving higher throughput of structurally distinct hits than baselines.

Interspecies interactions drive community-level selection in microbial coalescence

This study shows that interspecies interaction strength determines whether communities or species are the units of selection during microbial coalescence.

MethylGPT: a foundation model for the DNA methylome

MethylGPT is a transformer-based model trained on human DNA methylation data that accurately predicts methylation values and improves age and disease prediction.