Author

Junfu Guo

BGI Group (China)ORCID 0000-0002-4195-7031Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Assay:long-read sequencing· 1 Research Focus:spatial domain detection· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Xun XuiD· 2 shared Yong ZhangiD· 2 shared Yuxiang LiiD· 2 shared Bichao CheniD· 1 shared Bohan ZhangiD· 1 shared Bowen Ma· 1 shared Chang Shi· 1 shared Chao LiuiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersGenomics

Xun XuORCID

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3 papers

Recent·Most cited

BioinformaticsNature CommunicationsPeer-reviewedSep 6, 2024

ST-GEARS: Advancing 3D Downstream Research through Accurate Spatial Information Recovery

Tianyi Xia, Luni Hu, Lulu Zuo…·Shuangsang Fang

ST-GEARS improves spatial information recovery in 3D spatial transcriptomics by aligning sections and correcting distortions, enhancing accuracy for downstream analysis.

13 citations

spatial transcriptomicsstatistical model

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GenomicsNature CommunicationsPeer-reviewedDec 10, 2022

Spatial-ID: a cell typing method for spatially resolved transcriptomics via transfer learning and spatial embedding

Rongbo Shen, Lin Liu, Zihan Wu…·Jianhua Yao

Spatial-ID improves cell type annotation in spatial transcriptomics by combining transfer learning and spatial embedding, outperforming existing methods on public datasets.

86 citationstop 2%

spatial transcriptomicsdeep learning

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BioinformaticsFrontiers in GeneticsPeer-reviewedMar 18, 2021

stLFRsv: a germline SV analysis pipeline using co-barcoded reads

Junfu Guo, Shi Chang, Xi Chen…·Hongmei Zhu

stLFRsv detects structural variations using co-barcoded long reads, achieving 74.2% precision and 22.3% recall for deletions in HG002/NA24385.

5 citations

long-read sequencingexperimental assay

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