Author

Steven J. Pastor

Children's Hospital of PhiladelphiaORCID 0000-0002-4204-1383Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Bernice E. MorrowiD· 2 shared Beverly S. EmanueliD· 2 shared Donna M. McDonald‐McGinniD· 2 shared Aime T. FrancoiD· 1 shared Ann SwilleniD· 1 shared Arnold Z. OlaliiD· 1 shared Curtis R. CoughliniD· 1 shared Dana V. Mitchell· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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2 shared papersGenomics

Bernice E. MorrowORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMay 14, 2025

SWANS: A highly configurable analysis pipeline for single-cell and single-nuclei RNA-sequencing data

Katherine Beigel, Eric K. Wafula, Dana V. Mitchell…·Erin Renée Reichenberger

SWANS is a configurable scRNA-seq analysis pipeline that integrates multiple methods and generates interactive reports for data visualization and comparison.

4 citations

scRNA-seqstatistical model

GenomicsbioRxivPreprintJul 8, 2024

Optically Mapped Black Genomes: Distinct Structures and 22q11.2 Deletion Syndrome Mechanisms

Steven J. Pastor, Oanh Tran, Ryan Lapointe…·Beverly S. Emanuel

The paper analyzes optical mapping data from Black and white genomes to reveal structural differences in 22q11.2 low copy repeats (LCR22s) and their potential role in the lower prevalence of 22q11.2DS in Black individuals.

DOI 10.1101/2024.07.08.602568

humanwhole-genome sequencing

GenomicsGenome ResearchPeer-reviewedSep 1, 2019

The 22q11 low copy repeats are characterized by unprecedented size and structure variability

Wolfram Demaerel, Yulia Mostovoy, Feyza Yilmaz…·Joris Robert Vermeesch

The paper characterizes the structural variability of 22q11 low copy repeats (LCRs) using optical and Bionano mapping, revealing high haplotype diversity and population-specific differences.

57 citations

humanexperimental assay