Author

Ernesto Soto‐Reyes

Universidad Autónoma MetropolitanaORCID 0000-0002-4219-6406Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:gene regulatory network inference· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Aylin Del Moral‐MoralesiD· 2 shared Cynthia SámanoiD· 2 shared José Antonio Ocampo‐CervantesiD· 2 shared Rodrigo González‐BarriosiD· 2 shared Adolfo López-OrnelasiD· 1 shared Alejandra CerveraiD· 1 shared César Meléndez-RamíreziD· 1 shared Clementina Castro HernándeziD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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2 shared papersGenomics

Aylin Del Moral‐MoralesORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintAug 14, 2025

Identification of enhancer chromatin signatures involved in dopaminergic induction through multi-omics analysis

Mayela Giacoman-Lozano, César Meléndez-Ramírez, Adolfo López-Ornelas…·Raquel Cuevas‐Díaz Durán

The paper identifies enhancer chromatin signatures involved in dopaminergic neuron differentiation through multi-omics analysis of human embryonic stem cells.

DOI 10.1101/2025.08.14.670306

humanChIP-seq

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GenomicsbioRxivPreprintApr 4, 2024

Retrotransposon expression is upregulated by aging and suppressed during regeneration of the limb in the axolotl (Ambystoma mexicanum)

Samuel Ruiz‐Pérez, Karla Torres‐Arciga, Cynthia Sámano…·Rodrigo González‐Barrios

This study shows that retrotransposon expression increases with age in axolotls but decreases during limb regeneration, suggesting a role in age-related regenerative decline.

DOI 10.1101/2024.04.04.588033

mousebulk RNA-seq

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Molecular BiologybioRxivPreprintSep 7, 2023

Key Proteins for Regeneration in A. mexicanum: Transcriptomic Insights from Aged and Juvenile Limbs

Aylin Del Moral‐Morales, Cynthia Sámano, José Antonio Ocampo‐Cervantes…·Ernesto Soto‐Reyes

The paper identifies key genes involved in regeneration in axolotl limbs by comparing transcriptomic data from juvenile and aged axolotls.

1 citation

Drosophilabulk RNA-seq

𝕏 PostBluesky