Author

Samantha R. Joubran

Broad InstituteORCID 0000-0002-4267-2492Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Organism:human· 1 Assay:scATAC-seq· 1 Assay:scRNA-seq· 1 Research Focus:sequence-to-function modeling· 1

Frequent Co-Authors

Abigail R. RapiejkoiD· 1 shared Alexa B. Davis· 1 shared Alexis CaulieriD· 1 shared Diego A. Vargas-BlancoiD· 1 shared Emily King· 1 shared Eric S. LanderiD· 1 shared Huaming SuniD· 1 shared Jessica M. KellyiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperMolecular Biology

Abigail R. RapiejkoORCID

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2 papers

Recent·Most cited

GenomicsSciencePeer-reviewedApr 4, 2025

Transcription factor networks disproportionately enrich for heritability of blood cell phenotypes

Jorge Diego Martin-Rufino, Alexis Caulier, Seayoung Lee…·Vijay G. Sankaran

The paper identifies TF-sensitive chromatin regions as highly enriched for heritability of blood cell phenotypes, using a novel single-cell multi-omics approach.

26 citationstop 1%

humanscATAC-seq

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Molecular BiologybioRxivPreprintMar 14, 2023

Mycobacterial RNase E cleaves with a distinct sequence preference and controls the degradation rates of most Mycolicibacterium smegmatis mRNAs

Ying Zhou, Huaming Sun, Diego A. Vargas-Blanco…·Scarlet S. Shell

This study defines the role of RNase E in mRNA degradation in Mycolicibacterium smegmatis, showing it limits degradation of 89% of protein-coding genes and has distinct sequence preferences compared to gram-negative bacteria.

1 citation

bulk RNA-seqexperimental assay

𝕏 PostBluesky