Author

Jiaojiao Ji

Agricultural Genomics Institute at ShenzhenORCID 0000-0002-4445-8692Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Synthetic Biology· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 3 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:genome assembly· 1 Assay:metabolomics· 1

Frequent Co-Authors

Bao NieiD· 2 shared Cheng LiiD· 2 shared Lanlan Zang· 2 shared Xiaoxu HaniD· 2 shared Xueqing CheniD· 2 shared Zhuangwei HouiD· 2 shared Cheng SuniD· 1 shared Christopher PlottiD· 1 shared

Activity by Year

2023-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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2 shared papersGenomics

Bao NieORCID

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3 papers

Recent·Most cited

Integrative multi-omics data elucidating the biosynthesis and regulatory mechanisms of furanocoumarins in Angelica dahurica

Jiaojiao Ji, Xiaoxu Han, Lanlan Zang, Yushan Li, Liqun Lin, Donghua Hu, Shichao Sun, Yonglin Ren, Garth L. Maker, Zefu Lu, Li Wang

This study identifies biosynthesis pathways and regulatory mechanisms of furanocoumarins in Angelica dahurica using multi-omics data and experimental validation.

bioRxiv · Jul 23, 2024 · PreprintSynthetic Biology

Extraordinary preservation of gene collinearity over three hundred million years revealed in homosporous lycophytes

Cheng Li, David Wickell, Li‐Yaung Kuo, Xueqing Chen, Bao Nie, Xuezhu Liao, Dan Peng, Jiaojiao Ji, Jerry W. Jenkins, Mellissa Williams, Shengqiang Shu, Christopher Plott, Kerrie Barry, Shanmugam Rajasekar, Jane Grimwood, , Li Wang

This study presents genome assemblies of two homosporous lycophytes, revealing preserved gene collinearity and slow genome evolution over 350 million years.

Proceedings of the National Academy of Sciences · Jan 18, 2024Peer-reviewedGenomics

Haplotype-phased genome revealed the butylphthalide biosynthesis and hybrid origin of Ligusticum chuanxiong

Bao Nie, Xueqing Chen, Zhuangwei Hou, Cheng Li, Wenkai Sun, Jiaojiao Ji, Lanlan Zang, Song Yang, Pengxiang Fan, Wenhao Zhang, Hang Li, Yuzhu Tan, Wei Li, Lı Wang

This study presents the haplotype-resolved genome of Ligusticum chuanxiong, identifies enzymes involved in butylphthalide biosynthesis, and reveals its hybrid origin.

bioRxiv · Jun 13, 2023 · PreprintSynthetic Biology