Author

Ahmed A. Abbas

The University of Texas Southwestern Medical CenterORCID 0000-0002-4486-5669Unclaimed ORCID profile · follow to get notified of new preprints

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Genomics· 1

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Research Focus:benchmarking· 1 Assay:ChIP-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:statistical model· 1

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Jiapei YuaniD· 1 shared Khyati Raghunath ChandratreiD· 1 shared Michael Q. ZhangiD· 1 shared Ram Shankar ManiiD· 1 shared Yunpeng GaoiD· 1 shared

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2024-2024 · peak 1/yr

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Jiapei YuanORCID

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1 paper

Recent·Most cited

GenomicsGenome biologyPeer-reviewedJan 12, 2024

Accurate prediction of cohesin-mediated 3D genome organization from 2D chromatin features

Ahmed A. Abbas, Khyati Raghunath Chandratre, Yunpeng Gao…·Ram Shankar Mani

The paper introduces ChIPr, a model predicting cohesin-mediated chromatin interactions from 2D features, showing strong correlation with ChIA-PET data and capturing cell-type-dependent loops.

13 citations

humanChIP-seq

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