Author
International Centre for Diarrhoeal Disease ResearchORCID 0000-0002-4607-7439Unclaimed ORCID profile · follow to get notified of new preprints
8 papers
Recent·Most cited
Reyan Coskun, ZeNan Chang, Kali M. Pruss, Haoxin Liu, Athziri Marcial Rodriguez, Evan Lee, Michael Diamond, Tahmeed Ahmed, Michael J. Barratt, Jeffrey I. Gordon
The paper shows that the gut microbiota of undernourished women negatively affects placental development in mice, with potential bacterial targets for improving prenatal outcomes.
bioRxiv · Aug 21, 2026 · PreprintSystems Biology
Kali M. Pruss, C.-Y. Kao, Alexandra E. Byrne, Robert Yuzen Chen, Blanda Di Luccia, Laura Karvelyte, Reyan Coskun, Mackenzie Lemieux, Keshav Nepal, Daniel M. Webber, Matthew Charles Hibberd, Y Wang, Haoxin Liu, Dmitry A. Rodionov, Andrei L. Osterman, , Jeffrey I. Gordon
This study shows that a perturbed small intestinal microbiota from stunted children can induce EED-like features in offspring through inflammation and immune changes.
Nature Microbiology · Jun 16, 2026Peer-reviewedMicrobiology
Yamini Mathur, Caroline M. Boyd, Jeannette E. Farnham, Md Mamun Monir, Mohammad Tarequl Islam, Marzia Sultana, Tahmeed Ahmed, Munirul Alam, Kimberley D. Seed
The paper uses clinical surveillance in Bangladesh to study phage-pathogen coevolution in Vibrio cholerae, identifying a parasitic MGE that drives a selective sweep during a major outbreak.
Nature · Mar 11, 2026Peer-reviewedMicrobiology
Yi Wang, Hao-Wei Chang, Jiye Cheng, Daniel M. Webber, Hannah M. Lynn, Matthew Charles Hibberd, C.-Y. Kao, Ishita Mostafa, Tahmeed Ahmed, Michael J. Barratt, Jeffrey I. Gordon
This paper uses gnotobiotic mice to model microbiome repair effects in undernourished children, revealing changes in gut cell function and microbial gene expression.
Proceedings of the National Academy of Sciences · Nov 25, 2025Peer-reviewedMicrobiology
Kine Eide Kvitne, Celeste Allaband, Jennifer C. Onuora, Daniela S. Perry, Simone Zuffa, Lucas Patel, Vincent Charron‐Lamoureux, Ipsita Mohanty, Kristija Sejane, Abubaker Patan, Abdullah Al Mahmud, Tahmeed Ahmed, Diego G. Bassani, Antonio González, Davidson Howes Hamer, , Rob D. Knight
The paper examines how environmental and maternal factors influence infant gut metabolism through microbiome and metabolome profiling in Bangladeshi mother-infant pairs.
bioRxiv · Jul 24, 2025 · PreprintMicrobiology
Md Mamun Monir, Talal Hossain, Masatomo Morita, Makoto Ohnishi, Fatema‐Tuz Johura, Marzia Sultana, Shirajum Monira, Tahmeed Ahmed, Nicholas Robert Thomson, Haruo Watanabe, Anwar Huq, Rita R. Colwell, Kimberley D. Seed, Munirul Alam
The paper performs a genomic analysis of Vibrio cholerae El Tor strains from Bangladesh, identifying two lineages, BD-1 and BD-2, and their distinct genomic traits and epidemiological implications.
Microbiology Spectrum · Mar 22, 2022Peer-reviewedGenomics
Parag Palit, Farhana Tasnim Chowdhury, Namrata Baruah, Bonoshree Sarkar, Sadia Noor Mou, Mehnaz Kamal, Towfida Jahan Siddiqua, Zannatun Noor, Tahmeed Ahmed
The paper identifies three siRNA candidates targeting Shigella virulence genes through computational analysis, showing potential for RNAi-based therapy against shigellosis.
bioRxiv · Mar 9, 2021 · PreprintBioinformatics
Md Ohedul Islam, Parag Palit, Jakaria Shawon, Md Kamrul Hasan, Mustafa Mahfuz, Tahmeed Ahmed, Dinesh Mondal
The paper uses computational methods to identify potential inhibitors of MSP-1 in P. vivax, suggesting new therapeutic targets for malaria treatment.
bioRxiv · May 2, 2020 · PreprintBioinformatics