Author

Patrick Soon‐Shiong

ImmunityBio (United States)ORCID 0000-0002-4682-8298Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:ATAC-seq· 1 Research Focus:benchmarking· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Assay:metagenomics· 1

Frequent Co-Authors

Ashma ChakrawartiiD· 1 shared Charles Joseph VaskeiD· 1 shared Christopher M. BastingiD· 1 shared Christopher W. SzetoiD· 1 shared Erik Swanson· 1 shared Jeffrey S. MilleriD· 1 shared Jeffrey T. SafritiD· 1 shared Jeremi Sudol· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperMicrobiology

Ashma ChakrawartiORCID

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2 papers

Recent·Most cited

Pre-treatment Microbiome Diversity and Function is associated with Expansion of Cytotoxic and Regulatory Immune Populations after N-803 treatment in People with HIV

Ashma Chakrawarti, Ross T. Cromarty, Christopher M. Basting, Jodi L. Anderson, Ty A. Schroeder, Kevin Escandón-Vargas, Robin R. Shields‐Cutler, Robert Langat, Erik Swanson, Patrick Soon‐Shiong, Jeffrey T. Safrit, Leonard S. Sender, Sandeep K. Reddy, Jeffrey S. Miller, Joshua Rhein, , Nichole R. Klatt

This study shows that pre-treatment gut microbiome diversity in HIV patients correlates with immune activation and reduced HIV RNA+ cells after N-803 treatment.

bioRxiv · Oct 1, 2025 · PreprintMicrobiology

Deep learning with implicit handling of tissue-specific phenomena predicts tumor DNA accessibility and immune activity

Kamil Wnuk, Jeremi Sudol, Kevin Bijan Givechian, Patrick Soon‐Shiong, Shahrooz Rabizadeh, Christopher W. Szeto, Charles Joseph Vaske

The paper develops a deep learning model to predict DNA accessibility and immune activity in tumors using RNA-seq data, achieving high accuracy across diverse genomic regions and cohorts.

iScience · Sep 14, 2019Peer-reviewedBioinformatics