Author

Rebecca Bacon

Duke Medical CenterORCID 0000-0002-4941-682XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

Daniel Amador‐NogueziD· 1 shared Gabriel I Miranda-ContrerasiD· 1 shared Hanhyeok ImiD· 1 shared Jaron C. ThompsoniD· 1 shared Kaixiang Loke· 1 shared Lauren Lucas· 1 shared Ophelia S. VenturelliiD· 1 shared Simon M. GrayiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 36 mutual co-author links

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1 shared paperSystems Biology

Daniel Amador‐NoguezORCID

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1 paper

Recent·Most cited

Mechanistic and machine learning models design human gut consortia that robustly inhibit Clostridioides difficile

Hanhyeok Im, Yiyi Liu, Jaron C. Thompson, Gabriel I Miranda-Contreras, Kaixiang Loke, Rebecca Bacon, Lauren Lucas, Daniel Amador‐Noguez, Simon M. Gray, Ophelia S. Venturelli

The paper designs synthetic gut microbial communities using mechanistic and machine learning models to robustly inhibit C. difficile growth in vitro and in vivo.

bioRxiv · Aug 5, 2026 · PreprintSystems Biology