Author

Joshua Almonte

Cornell UniversityORCID 0000-0002-5267-2162Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:mouse· 1 Research Focus:protein design· 1

Frequent Co-Authors

Andrew Ahn· 1 shared Azmain AlamgiriD· 1 shared Cara M. RobertusiD· 1 shared Christopher A. AlabiiD· 1 shared Erik H. ThiedeiD· 1 shared Harrison W. ChaniD· 1 shared Jeanette WangiD· 1 shared Minh Triet Vu· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 18 mutual co-author links

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1 shared paperBiochemistry

Andrew Ahn

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2 papers

Recent·Most cited

Multi-Peptide Prompting Enables In-Context Learning in Protein Language

Joshua Almonte, Minh Triet Vu, Andrew Ahn, Erik H. Thiede

This paper introduces multi-peptide example prompts (MPEPs) to enable in-context learning in protein language models for peptide classification without training.

bioRxiv · Oct 24, 2026 · PreprintBiochemistry

Nanoparticle-mediated delivery of peptide-based degraders enables targeted protein degradation

Souvik Ghosal, Cara M. Robertus, Jeanette Wang, Harrison W. Chan, Azmain Alamgir, Joshua Almonte, Christopher A. Alabi

This study uses lipid nanoparticles to deliver peptide-based degraders, enabling targeted protein degradation in cancer cells and demonstrating reduced target levels in mice.

bioRxiv · Mar 17, 2024 · PreprintBioengineering