Quoseena Mir

This study identifies AZIN1 A-to-I editing as a marker of kidney recovery potential following inflammation.

Penguin is a tool that uses machine learning to predict pseudouridine sites in direct RNA nanopore sequencing data, achieving high accuracy compared to existing methods.

Nm-Nano predicts Nm sites in Nanopore RNA sequencing data with high accuracy, identifying frequently modified genes in human cell lines and their biological roles.

Sequoia is a visualization tool for analyzing nanopore sequencing data, using dynamic time warping and t-SNE to display signal similarities and enabling interactive exploration and export of raw signals.

This study identifies 1408 genes and 661 proteins differentially regulated during zebrafish caudal fin regeneration using transcriptomics and proteomics.

This study uses CRISPR-Cas9 to knock down Annexin 2a and 2b genes in zebrafish caudal fin regeneration, showing slowed regeneration and downregulation of related genes.