Mark A. Holmes

This study identifies 52 genes in MRSA associated with reduced vancomycin survival, emphasizing the role of prophage loci, metabolism, and stress responses over discrete resistance mechanisms.

HAM-ART improves metagenomics by linking AMR genes to host chromosomes and plasmids, showing differences in AMR gene distribution between pig farms with varying antibiotic use.

This paper investigates the re-emergence of group B Streptococcus in dairy cattle by analyzing genomic data from historical and contemporary isolates, finding evidence of human-to-cattle transmission and strain replacement.