Author

Mansi Srivastava

Indiana University – Purdue University IndianapolisORCID 0000-0002-5512-222XUnclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Mansi Srivastava2 papers · Heidelberg University

Biology Disciplines

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Bioinformatics· 2 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:benchmarking· 1 Assay:CRISPR screen· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Rajneesh SrivastavaiD· 3 shared Sarath Chandra JangaiD· 3 shared Alexander KrohannoniD· 1 shared Bryan C. DickinsoniD· 1 shared Simone RauchiD· 1 shared Swapna Vidhur DaulatabadiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 12 mutual co-author links

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3 shared papersBioinformatics

Rajneesh SrivastavaORCID

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3 papers

Recent·Most cited

BioinformaticsBMC GenomicsPeer-reviewedMar 2, 2022

CASowary: CRISPR-Cas13 guide RNA predictor for transcript depletion

Alexander Krohannon, Mansi Srivastava, Simone Rauch…·Sarath Chandra Janga

CASowary predicts CRISPR-Cas13 guide RNA efficacy using machine learning and transcriptome data from HEK293 cells.

13 citations

humanCRISPR screen

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Molecular BiologyScientific ReportsPeer-reviewedJan 13, 2021

Transcriptome-wide high-throughput mapping of protein-RNA occupancy profiles using POP-seq

Mansi Srivastava, Rajneesh Srivastava, Sarath Chandra Janga

The paper introduces POP-seq, a method for unbiased protein-RNA occupancy profiling, and shows it identifies interaction sites across various RNA types and associates with genomic variants.

15 citations

humanbulk RNA-seq

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BioinformaticsInternational Journal of Molecular SciencesPeer-reviewedSep 25, 2020

Role of SARS-CoV-2 in altering the RNA binding protein and miRNA directed post-transcriptional regulatory networks in humans

Rajneesh Srivastava, Swapna Vidhur Daulatabad, Mansi Srivastava, Sarath Chandra Janga

This study systematically analyzes how SARS-CoV-2 alters RNA binding protein and miRNA-directed post-transcriptional regulatory networks in human tissues.

51 citations

humanbulk RNA-seq

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