Author

Robert J. Ramos

Cooperative Institute for Research in Environmental SciencesORCID 0000-0002-5545-702XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Ecology· 2

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Organism:fungi (other)· 1 Research Focus:host-pathogen & immune response· 1 Assay:metagenomics· 1 Organism:plant (other)· 1

Frequent Co-Authors

Adriana L. Romero‐OlivaresiD· 1 shared Brianna L. Richards· 1 shared Cameron EganiD· 1 shared Carlos A. Aguilar‐TriguerosiD· 1 shared James D. BeveriD· 1 shared Kabir PeayiD· 1 shared Kira M. T. LynniD· 1 shared Kristin M. BarbouriD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperEcology

Adriana L. Romero‐OlivaresORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

A novel pipeline for the rapid expansion of ecological trait databases using LLMs

Robert J. Ramos, Michelle E. Afkhami, Carlos A. Aguilar‐Trigueros, Kristin M. Barbour, Priscila Chaverri, Sarah A Cuprewich, Cameron Egan, Kira M. T. Lynn, Kabir Peay, Veera Norros, Adriana L. Romero‐Olivares, Lauren Ward, V. Bala Chaudhary

This paper introduces an LLM-based pipeline to automate trait data extraction from fungal descriptions, showing promise but with variable accuracy across traits.

bioRxiv · Mar 12, 2026 · PreprintEcology

Plant phylogeny and life history predict AM fungal species and genetic composition, but only life history and genetic composition predict feedback

Robert J. Ramos, Brianna L. Richards, Peggy Ann Schultz, James D. Bever

The paper tests how plant phylogeny and life history influence AM fungal communities and feedbacks, finding life history and genetic composition better predict feedbacks than phylogeny.

bioRxiv · Jul 10, 2025 · PreprintEcology