Author

Amy V. Jennison

Queensland HealthORCID 0000-0002-5599-7480Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 3 Research Focus:benchmarking· 2 Research Focus:database / resource· 2 Approach:statistical model· 2 Research Focus:genome assembly· 1 Research Focus:phylogenetics / evolution· 1 Organism:virus· 1

Frequent Co-Authors

Benjamin P. HowdeniD· 2 shared Irani U. RathnayakeiD· 2 shared Qinning WangiD· 2 shared Rikki GrahamiD· 2 shared Susan A. BallardiD· 2 shared Timothy Paul StineariD· 2 shared Torsten SeemanniD· 2 shared Vitali SintchenkoiD· 2 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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2 shared papersGenomics

Benjamin P. HowdenORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Bioinformatic investigation of discordant sequence data for SARS-CoV-2: insights for robust genomic analysis during pandemic surveillance

Sara E. Zufan, Katherine A. Lau, Angela Donald, Tuyet Hoang, Charles S. P. Foster, Chisha T. Sikazwe, Torsten Theis, William D. Rawlinson, Susan A. Ballard, Timothy Paul Stinear, Benjamin P. Howden, Amy V. Jennison, Torsten Seemann

This study investigates discordant sequence data in SARS-CoV-2 whole genome sequencing to improve bioinformatic quality standards and surveillance practices.

Microbial Genomics · Nov 29, 2023Peer-reviewedGenomics

Genomic epidemiology and multilevel genome typing of Australian Salmonella enterica serovar Enteritidis

Lijuan Luo, Michael Payne, Qinning Wang, Sandeep Kaur, Irani U. Rathnayake, Rikki Graham, Mailie L. Gall, Jenny L. Draper, Elena M. Martinez, Sophie Octavia, Mark M. Tanaka, Amy V. Jennison, Vitali Sintchenko, Ruiting Lan

This study uses multilevel genome typing to analyze Australian Salmonella Enteritidis isolates, finding strong epidemiological links to Asian strains and a local outbreak linked to European isolates.

Microbiology Spectrum · Jan 10, 2023Peer-reviewedGenomics

Complete microbial genomes for public health in Australia and Southwest Pacific

Sarah Louise Baines, Anders Gonçalves da Silva, Glen P. Carter, Amy V. Jennison, Irani U. Rathnayake, Rikki Graham, Vitali Sintchenko, Qinning Wang, Rebecca J. Rockett, Verlaine Joy Timms, Elena Martínez, Susan A. Ballard, Takehiro Tomita, Nicole S. Isles, Kristy Horan, , Communicable Diseases Genomics Network (CDGN)

The paper presents complete microbial genomes for public health in Australia and the Southwest Pacific to enhance global genomic resources and support regional surveillance.

Microbial Genomics · Nov 12, 2020Peer-reviewedGenomics