Author

Berna Doğan

Bahçeşehir UniversityORCID 0000-0002-5650-5177Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:drug response / drug discovery· 2 Approach:simulation· 2 Approach:statistical model· 2 Approach:machine learning (classical)· 1 Research Focus:protein structure prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Serdar DurdağıiD· 2 shared Aida ShahrakiiD· 1 shared Ali IşbiliriD· 1 shared Duaa KananiD· 1 shared İsmail EroliD· 1 shared Martin J. LohseiD· 1 shared Necla Birgül İyisoniD· 1 shared Tarek KananiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 16 mutual co-author links

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2 shared papersBioinformatics

Serdar DurdağıORCID

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3 papers

Recent·Most cited

BioinformaticsACS OmegaPeer-reviewedOct 20, 2025

Targeting Ubiquitin-Specific Protease 7 (USP7): A Pharmacophore-Guided Drug Repurposing and Physics-Based Molecular Simulations Study

Duaa Kanan, Tarek Kanan, Berna Doğan…·Serdar Durdağı

This study identifies potential USP7 inhibitors through virtual screening and molecular simulations, finding 12 compounds with favorable binding and anticancer activity.

3 citations

statistical modelsimulation

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJul 10, 2022

Machine learning approaches to quantitatively predict selectivity of compounds against hDAC1 and hDAC6 isoforms

Berna Doğan

The paper develops machine learning models to predict compound selectivity against hDAC1 and hDAC6 isoforms using bioactivity data.

2 citations

machine learning (classical)drug response / drug discovery

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BioinformaticsJournal of Chemical Information and ModelingPeer-reviewedJan 21, 2021

Structural and functional characterization of allatostatin receptor type-C of Thaumetopoea pityocampa revealed the importance of Q2716.55 residue in G protein-dependent activation pathway

Aida Shahraki, Ali Işbilir, Berna Doğan…·Necla Birgül İyison

The paper characterizes the structure and function of AstR-C in T.pit, identifying Q2716.55 as critical for G protein-dependent activation.

7 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky