Author

Kendra Baumgartner

Agricultural Research ServiceORCID 0000-0002-5682-9016Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:gene regulatory network inference· 4 Approach:statistical model· 4 Approach:experimental assay· 2 Assay:whole-genome sequencing· 2 Research Focus:database / resource· 1 Organism:fungi (other)· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1

Frequent Co-Authors

Dario CantùiD· 5 shared Abraham Morales‐CruziD· 4 shared Philippe E. RolshauseniD· 4 shared Rosa Elia Figueroa-BalderasiD· 4 shared Andrea MinioiD· 3 shared Daniel P. LawrenceiD· 3 shared Jadran F. GarcíaiD· 3 shared Renaud TravadoniD· 3 shared

Activity by Year

2017-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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5 shared papersGenomics

Dario CantùORCID

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Author profile →

5 papers

Recent·Most cited

Genome analysis of the esca-associated Basidiomycetes Fomitiporia mediterranea, Fomitiporia polymorpha, Inonotus vitis, and Tropicoporus texanus reveals virulence factor repertoires characteristic of white-rot fungi

Jadran F. García, Rosa Elia Figueroa-Balderas, Gwénaëlle Comont, Chloé E. L. Delmas, Kendra Baumgartner, Dario Cantù

The paper presents genome sequences of four esca-associated Basidiomycetes, identifies virulence factors, and highlights their evolutionary patterns related to plant pathogenesis.

G3 Genes Genomes Genetics · Aug 14, 2024Peer-reviewedGenomics

Comparative pangenomic insights into the distinct evolution of virulence factors among grapevine trunk pathogens

Jadran F. García, Abraham Morales‐Cruz, Noé Cochetel, Andrea Minio, Rosa Elia Figueroa-Balderas, Philippe E. Rolshausen, Kendra Baumgartner, Dario Cantù

The paper analyzes pangenomes of grapevine trunk pathogens to compare the evolution of virulence factors across species.

Molecular Plant-Microbe Interactions · Nov 7, 2023Peer-reviewedGenomics

Phylogenomics of plant-associated Botryosphaeriaceae species

Jadran F. García, Daniel P. Lawrence, Abraham Morales‐Cruz, Renaud Travadon, Andrea Minio, Rufina Hernández-Martínez, Philippe E. Rolshausen, Kendra Baumgartner, Dario Cantù

This study compares the phylogenomic evolution of virulence-related gene families in Botryosphaeriaceae fungi to identify associations with pathogenicity in woody plants.

Frontiers in Microbiology · Mar 18, 2021Peer-reviewedGenomics

Whole-genome resequencing and pan-transcriptome reconstruction highlight the impact of genomic structural variation on secondary metabolism gene clusters in the grapevine Esca pathogen Phaeoacremonium minimum

Mélanie Massonnet, Abraham Morales‐Cruz, Andrea Minio, Rosa Elia Figueroa-Balderas, Daniel P. Lawrence, Renaud Travadon, Philippe E. Rolshausen, Kendra Baumgartner, Dario Cantù

The paper identifies structural genomic variation affecting secondary metabolism gene clusters in Phaeoacremonium minimum, highlighting the need for a pan-transcriptome reference to capture virulence factor diversity.

Frontiers in Microbiology · Aug 13, 2018Peer-reviewedGenomics

Closed-reference metatranscriptomics enables in planta profiling of putative virulence activities in the grapevine trunk-disease complex

Abraham Morales‐Cruz, Gabrielle Allenbeck, Rosa Elia Figueroa-Balderas, Vanessa Ashworth, Daniel P. Lawrence, Renaud Travadon, Rhonda J. Smith, Kendra Baumgartner, Philippe E. Rolshausen, Dario Cantù

This study develops a closed-reference metatranscriptomics approach to profile virulence activities of multiple grapevine trunk pathogens in planta.

Molecular Plant Pathology · Feb 20, 2017Peer-reviewedGenomics