Author

Daniel Podlesny

European Molecular Biology LaboratoryORCID 0000-0002-5685-0915Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 4

Signature Assays, Organisms & Methods

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Assay:metagenomics· 4 Approach:statistical model· 4 Research Focus:ecology & biodiversity· 2 Organism:human· 2 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Organism:mouse· 1

Frequent Co-Authors

Anthony FullamiD· 4 shared Josef SchilleriD· 4 shared Michael KuhniD· 4 shared Peer Bork BiD· 4 shared Shahriyar Mahdi RobbaniiD· 4 shared Chan Yeong KimiD· 3 shared Christian SchudomaiD· 3 shared Thomas SchmidtiD· 3 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 44 mutual co-author links

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4 shared papersMicrobiology

Anthony FullamORCID

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4 papers

Recent·Most cited

MicrobiologybioRxivPreprintJul 28, 2026

Planetary structure and drivers of diazotroph communities reveal key reservoirs of nitrogen-fixation potential

Lucas J. Ustick, Hana Ros, Shahriyar Mahdi Robbani…·Peer Bork B

The paper catalogs diazotroph genomes and analyzes their distribution across environments, identifying freshwater and sedimentary ecosystems as key nitrogen-fixation reservoirs.

DOI 10.64898/2026.07.27.741065

metagenomicsstatistical model

𝕏 PostBluesky

MicrobiologyCellPeer-reviewedFeb 9, 2026

Planetary microbiome structure and generalist-driven gene flow across disparate habitats

Chan Yeong Kim, Daniel Podlesny, Jonas Schiller…·Peer Bork B

The paper analyzes planetary microbiome structure and gene flow across habitats using metagenomic data, identifying generalist microbes as key drivers of gene transfer.

15 citationstop 1%

metagenomicsstatistical model

𝕏 PostBluesky

MicrobiologyNucleic Acids ResearchPeer-reviewedOct 31, 2025

✦ In-depth digest

Metalog: curated and harmonised contextual data for global metagenomics samples

Michael Kuhn, Thomas Schmidt, Pamela Ferretti…·Peer Bork B

Metalog manually curates and harmonises contextual metadata for 110,733 metagenomic samples from humans, animals, ocean water and other environments, linked to taxonomic profiles and SPIRE genomes.

8 citations

humanmultiple species

𝕏 PostBluesky

MicrobiologybioRxivPreprintAug 13, 2024

Refined Enterotyping Reveals Dysbiosis in Global Fecal Metagenomes

Marisa Isabell Keller, Suguru Nishijima, Daniel Podlesny…·Peer Bork

The paper refines enterotypes in global fecal metagenomes using fuzzy clustering and introduces an Enterotype Dysbiosis Score to assess disease associations.

16 citations

humanmetagenomics

𝕏 PostBluesky