Author

Kui Li

Agricultural Genomics Institute at ShenzhenORCID 0000-0002-5686-3898Unclaimed ORCID profile · follow to get notified of new preprints

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Kui Li4 papers · Agricultural Genomics Institute at Shenzhen

Biology Disciplines

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Genomics· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Approach:benchmark study· 1 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:GWAS / association mapping· 1 Approach:large language model· 1 Organism:non-human primate· 1

Frequent Co-Authors

Lijing BaiiD· 2 shared Lingzhao FangiD· 2 shared Alex ClopiD· 1 shared Bingjie LiiD· 1 shared Chen WeiiD· 1 shared Chengjie Chang· 1 shared Chongxiao Liang· 1 shared Daniel Crespo‐PiazueloiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersGenomics

Lijing BaiORCID

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3 papers

Recent·Most cited

Mapping the Landscape of Allele-Specific Expression In Porcine Genomes

Wen-ye Yao, Marta Gòdia, Lingzhao Fang, Martien A. M. Groenen, Lijing Bai, Kui Li, Ole Madsen

This study profiles allele-specific expression across 42 tissues and 34 pig breeds using an open-source pipeline, revealing widespread and tissue-specific allelic imbalance.

Genome biology · Jun 29, 2026Peer-reviewedGenomics

BOLE: A Knowledge-Enhanced Multi-Agent Framework for Intelligent Genomic Breeding

Zishuai Wang, Chongxiao Liang, Xiaoai Zhang, Wenkang Wei, Kui Li

BOLE translates high-level genomic breeding intent into validated workflows using a knowledge base and large language model reasoning.

bioRxiv · Feb 6, 2026 · PreprintGenomics

Integrating large-scale meta-GWAS and PigGTEx resources to decipher the genetic basis of complex traits in pig.

Zhiting Xu, Qing Lin, Xiaodian Cai, Zhanming Zhong, Jinyan Teng, Bingjie Li, Haonan Zeng, Yahui Gao, Zexi Cai, Xiaoqing Wang, Liangyu Shi, Xue Wang, Yi Wang, Zipeng Zhang, Yu Lin, , Zhe Zhang

The paper performs a multi-breed meta-GWAS in pigs to identify genomic regions associated with complex traits and integrates with PigGTEx to prioritize variant-gene-tissue-trait circuits.

National Science Review · Feb 14, 2025Peer-reviewedGenetics